Gene: Sopen11g007610
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g007610
- Transcript Identifier Sopen11g007610.1
- Gene Type Coding gene
- Location Spenn-ch11 : 5726468-5729394 : negative
Gene Family Information
- ID HOM05D001808
- #Genes/#Species 362/95
- Phylogenetic origin
- ID ORTHO05D001747
- #Genes/#Species 360/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g007610.1
Descriptions
- Description lysm domain GPI-anchored protein 1 precursor (LYM1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: cell wall macromolecule catabolic process | LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain , Peptidoglycan-binding Lysin subgroup | BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006955 | ISO | PLAZA Integrative Orthology | immune response | AT1G21880 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042834 | ISO | PLAZA Integrative Orthology | peptidoglycan binding | AT1G21880 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G21880 |
GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT1G21880 |
GO:0046658 | ISO | PLAZA Integrative Orthology | anchored component of plasma membrane | AT1G21880 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |