Gene: Sopen11g007610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g007610
  • Transcript Identifier Sopen11g007610.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 5726468-5729394 : negative

Gene Family Information

  • ID HOM05D001808
  • #Genes/#Species 362/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g007610.1

Descriptions

  • Description lysm domain GPI-anchored protein 1 precursor (LYM1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: cell wall macromolecule catabolic process | LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain , Peptidoglycan-binding Lysin subgroup | BEST Arabidopsis thaliana protein match is: Peptidoglycan-binding LysM domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006955
ISO
PLAZA Integrative Orthologyimmune response AT1G21880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042834
ISO
PLAZA Integrative Orthologypeptidoglycan binding AT1G21880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G21880
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT1G21880
GO:0046658
ISO
PLAZA Integrative Orthologyanchored component of plasma membrane AT1G21880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018392 LysM domain
IPR036779 LysM domain superfamily
Mapman id Description
35.1 not assigned.annotated