Gene: Sopen11g005410

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g005410
  • Transcript Identifier Sopen11g005410.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 3791614-3798662 : negative

Gene Family Information

  • ID HOM05D002409
  • #Genes/#Species 281/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g005410.1

Descriptions

  • Description A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. | MSCS-like 2 (MSL2) | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM)-related domain , Mechanosensitive ion channel MscS | BEST Arabidopsis thaliana protein match is: MSCS-like 3 .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
InterProtransmembrane transport
GO:0010020
ISO
PLAZA Integrative Orthologychloroplast fission AT1G58200
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G58200
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT1G58200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
ISO
PLAZA Integrative Orthologyion channel activity AT1G58200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G10490
GO:0009526
ISO
PLAZA Integrative Orthologyplastid envelope AT1G58200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR006685 Mechanosensitive ion channel MscS
IPR010920 LSM domain superfamily
IPR023408 Mechanosensitive ion channel MscS domain superfamily
IPR045042 Mechanosensitive ion channel protein YnaI-like
Mapman id Description
24.3.5 Solute transport.channels.mechanosensitive ion channel (MSL)