Gene: AT5G10490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G10490
  • Transcript Identifier AT5G10490.1
  • Gene Type Coding gene
  • Location Chr5 : 3300376-3304005 : negative

Gene Family Information

  • ID HOM05D002409
  • #Genes/#Species 281/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G10490.1
  • symbol MSL2
  • uniprot Q56X46

Descriptions

  • Description MSCS-like 2
  • Computational description MSCS-like 2 (MSL2); FUNCTIONS IN: ion channel activity; INVOLVED IN: plastid organization; LOCATED IN: chloroplast, membrane, plastid envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: MSCS-like 3 (TAIR:AT1G58200.2); Has 4292 Blast hits to 4247 proteins in 1034 species: Archae - 175; Bacteria - 2259; Metazoa - 236; Fungi - 59; Plants - 186; Viruses - 3; Other Eukaryotes - 1374 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
Gene Ontologytransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0009657
IGI
Gene Ontologyplastid organization1
GO:0010020
IGI
Gene Ontologychloroplast fission2
GO:0006811
IEA
GOA Databaseion transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
IGI
Gene Ontologyion channel activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0009526
IDA
Gene Ontologyplastid envelope1
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast3
GO:0031969
IEA
GOA Databasechloroplast membrane
GO:0009536
IEA
GOA Databaseplastid
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023408 Mechanosensitive ion channel MscS domain superfamily
IPR045042 Mechanosensitive ion channel protein YnaI-like
IPR010920 LSM domain superfamily
IPR006685 Mechanosensitive ion channel MscS
Mapman id Description
24.3.5 Solute transport.channels.mechanosensitive ion channel (MSL)