Gene: AT3G02830
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G02830
- Transcript Identifier AT3G02830.1
- Gene Type Coding gene
- Location Chr3 : 614075-615916 : positive
Gene Family Information
- ID HOM05D000568
- #Genes/#Species 974/99
- Phylogenetic origin
- ID ORTHO05D000628
- #Genes/#Species 727/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G02830.1
- symbol ZFN1
- Alias PNT1,PENTA 1
- uniprot Q8GXX7
Descriptions
- Description zinc finger protein 1
- Computational description zinc finger protein 1 (ZFN1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: zinc finger nuclease 3 (TAIR:AT5G16540.1); Has 1325 Blast hits to 706 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 147; Plants - 868; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017148 | IMP | Gene Ontology | negative regulation of translation | 1 |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | TAS | Gene Ontology | DNA binding | 2 |
| GO:0004518 | TAS | Gene Ontology | nuclease activity | 2 |
| GO:0010313 | IPI | Gene Ontology | phytochrome binding | 1 |
| GO:0048027 | IPI | Gene Ontology | mRNA 5'-UTR binding | 1 |
| GO:0003729 | IDA, HDA IBA | Gene Ontology | mRNA binding | 3 4 5 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005829 | IDA | Gene Ontology | cytosol | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.16 | RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF) |