Gene: Sopen11g001170
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g001170
- Transcript Identifier Sopen11g001170.2
- Gene Type Coding gene
- Location Spenn-ch11 : 162651-171948 : positive
Gene Family Information
- ID HOM05D002097
- #Genes/#Species 318/100
- Phylogenetic origin
- ID ORTHO05D002248
- #Genes/#Species 304/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g001170.2
Descriptions
- Description Splicing factor, CC1-like | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: mRNA processing | LOCATED IN: nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Splicing factor, CC1-like , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: Splicing factor, CC1-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006397 | IEA | InterPro | mRNA processing |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G16940 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |