Gene: Sopen10g034240
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g034240
- Transcript Identifier Sopen10g034240.1
- Gene Type Coding gene
- Location Spenn-ch10 : 81146119-81153563 : positive
Gene Family Information
- ID HOM05D000758
- #Genes/#Species 771/99
- Phylogenetic origin
- ID ORTHO05D002867
- #Genes/#Species 257/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g034240.1
Descriptions
- Description Encodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 (Plant VAMP-Associated protein 12). Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. | UNFERTILIZED EMBRYO SAC 18 (UNE18) | CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site , Oxysterol-binding protein | BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 3B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009567 | ISO | PLAZA Integrative Orthology | double fertilization forming a zygote and endosperm | AT5G02100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008289 | IEA | InterPro | lipid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G02100 |
| GO:0032934 | ISO | PLAZA Integrative Orthology | sterol binding | AT5G02100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G09300 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G02100 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.8.1.1 | Lipid metabolism.lipid trafficking.endoplasmic reticulum-plasma membrane lipid transfer.lipid transfer protein (ORP3a) |