Gene: Sopen10g033820
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g033820
- Transcript Identifier Sopen10g033820.1
- Gene Type Coding gene
- Location Spenn-ch10 : 80900283-80903088 : positive
Gene Family Information
- ID HOM05D000081
- #Genes/#Species 3710/99
- Phylogenetic origin
- ID ORTHO05D000036
- #Genes/#Species 3245/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen10g033820.1
Descriptions
- Description Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected | seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function allele corresponding to the DSL QTL are associated with a reduction in interploidy lethality. | TRANSPARENT TESTA GLABRA 2 (TTG2) | CONTAINS InterPro DOMAIN/s: DNA-binding WRKY | BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0009957 | ISO | PLAZA Integrative Orthology | epidermal cell fate specification | AT2G37260 |
GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT2G37260 |
GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc10g084380.1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0043565 | IEA | InterPro | sequence-specific DNA binding |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |