Gene: Sopen10g033820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g033820
  • Transcript Identifier Sopen10g033820.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 80900283-80903088 : positive

Gene Family Information

  • ID HOM05D000081
  • #Genes/#Species 3710/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g033820.1

Descriptions

  • Description Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected | seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function allele corresponding to the DSL QTL are associated with a reduction in interploidy lethality. | TRANSPARENT TESTA GLABRA 2 (TTG2) | CONTAINS InterPro DOMAIN/s: DNA-binding WRKY | BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009957
ISO
PLAZA Integrative Orthologyepidermal cell fate specification AT2G37260
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT2G37260
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc10g084380.1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003657 WRKY domain
IPR044810 WRKY transcription factor, plant
IPR036576 WRKY domain superfamily
Mapman id Description
15.5.22.1 RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY)