Gene: Sopen10g031200
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g031200
- Transcript Identifier Sopen10g031200.1
- Gene Type Coding gene
- Location Spenn-ch10 : 78763456-78767041 : negative
Gene Family Information
- ID HOM05D001274
- #Genes/#Species 492/99
- Phylogenetic origin
- ID ORTHO05D006369
- #Genes/#Species 144/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen10g031200.1
Descriptions
- Description novel cap-binding protein (NCBP) | FUNCTIONS IN: RNA binding, translation initiation factor activity | INVOLVED IN: translational initiation | LOCATED IN: cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Eukaryotic translation initiation factor 4E (eIF-4E) , Eukaryotic translation initiation factor 4E (eIF-4E), conserved site | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4E
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | IEA | InterPro | translational initiation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G18110 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G18110 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.4.2.6 | Protein biosynthesis.translation initiation.mRNA loading.RNA-cap-binding factor (4EHP) |