Gene: Sopen10g029810
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g029810
- Transcript Identifier Sopen10g029810.1
- Gene Type Coding gene
- Location Spenn-ch10 : 77565025-77566254 : positive
Gene Family Information
- ID HOM05D000257
- #Genes/#Species 1674/97
- Phylogenetic origin
- ID ORTHO05D008527
- #Genes/#Species 118/83
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen10g029810.1
Descriptions
- Description Ubiquitin carboxyl-terminal hydrolase family protein | LOCATED IN: mitochondrion | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant | BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000373 | ISO | PLAZA Integrative Orthology | Group II intron splicing | AT2G39120 |
| GO:0017004 | ISO | PLAZA Integrative Orthology | cytochrome complex assembly | AT2G39120 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G39120 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT2G39120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.4.2.1.7 | RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.splicing factor (WTF9) |