Gene: AT2G39120

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39120
  • Transcript Identifier AT2G39120.1
  • Gene Type Coding gene
  • Location Chr2 : 16321794-16322957 : positive

Gene Family Information

  • ID HOM05D000257
  • #Genes/#Species 1674/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39120.1
  • symbol WTF9
  • full_name what's this factor 9
  • uniprot Q9ZUZ6

Descriptions

  • Description Ubiquitin carboxyl-terminal hydrolase family protein
  • Computational description Ubiquitin carboxyl-terminal hydrolase family protein; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT3G58520.1); Has 404 Blast hits to 398 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
IMP
Gene OntologyGroup II intron splicing1
GO:0017004
IMP
Gene Ontologycytochrome complex assembly1
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IDA
Gene OntologyRNA binding1
GO:0003723
IEA
InterProRNA binding
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
Gene Ontologymitochondrion1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021099 Plant organelle RNA recognition domain
IPR045040 PORR family
Mapman id Description
16.11.4.2.1.7 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.splicing factor (WTF9)