Gene: Sopen10g024850

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g024850
  • Transcript Identifier Sopen10g024850.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 67079833-67080351 : positive

Gene Family Information

  • ID HOM05D000144
  • #Genes/#Species 2569/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g024850.1

Descriptions

  • Description Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle), Encodes cytosolic cyclophilin ROC3. | rotamase CYP 3 (ROC3) | FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity | INVOLVED IN: protein folding, signal transduction | LOCATED IN: cytosol, chloroplast, plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization
GO:0009704
ISO
PLAZA Integrative Orthologyde-etiolation AT4G38740
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT4G38740
GO:0001932
ISO
PLAZA Integrative Orthologyregulation of protein phosphorylation AT4G38740
GO:0009742
ISO
PLAZA Integrative Orthologybrassinosteroid mediated signaling pathway AT4G38740
GO:0009785
ISO
PLAZA Integrative Orthologyblue light signaling pathway AT4G38740
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G38740
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT4G38740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT4G38740
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G56070
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G38740
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G56070
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G38740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029000 Cyclophilin-like domain superfamily
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase
Mapman id Description
18.13.1 Protein modification.protein folding.protein folding catalyst (Cyclophilin)