Gene: AT4G38740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G38740
  • Transcript Identifier AT4G38740.1
  • Gene Type Coding gene
  • Location Chr4 : 18083620-18084138 : negative

Gene Family Information

  • ID HOM05D000144
  • #Genes/#Species 2569/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G38740.1
  • symbol ROC1
  • uniprot P34790

Descriptions

  • Description rotamase CYP 1
  • Computational description rotamase CYP 1 (ROC1); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, response to cadmium ion, signal transduction; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 16514 Blast hits to 16480 proteins in 2670 species: Archae - 108; Bacteria - 6825; Metazoa - 2927; Fungi - 1383; Plants - 1289; Viruses - 4; Other Eukaryotes - 3978 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000413
IEA
GOA Databaseprotein peptidyl-prolyl isomerization
GO:0000413
IBA
Gene Ontologyprotein peptidyl-prolyl isomerization1
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization
GO:0006457
IEA
GOA Databaseprotein folding
GO:0006457
IBA
Gene Ontologyprotein folding1
GO:0009626
IEA
GOA Databaseplant-type hypersensitive response
GO:0006952
IEA
GOA Databasedefense response
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0007165
ISS
Gene Ontologysignal transduction2
GO:0009785
IGI
Gene Ontologyblue light signaling pathway3
GO:0009742
IGI
Gene Ontologybrassinosteroid mediated signaling pathway3
GO:0009704
IMP
Gene Ontologyde-etiolation3
GO:0009585
IGI
Gene Ontologyred, far-red light phototransduction3
GO:0009416
IEP
Gene Ontologyresponse to light stimulus3
GO:0001932
IMP
Gene Ontologyregulation of protein phosphorylation3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
IEA
GOA Databasepeptidyl-prolyl cis-trans isomerase activity
GO:0003755
ISS, IBA
Gene Ontologypeptidyl-prolyl cis-trans isomerase activity1 2
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0016018
IBA
Gene Ontologycyclosporin A binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
ISS
Gene Ontologycytosol2 4
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR029000 Cyclophilin-like domain superfamily
IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase
Mapman id Description
18.13.1 Protein modification.protein folding.protein folding catalyst (Cyclophilin)