Gene: Sopen10g012250

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g012250
  • Transcript Identifier Sopen10g012250.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 26043397-26051049 : negative

Gene Family Information

  • ID HOM05D005316
  • #Genes/#Species 143/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g012250.1

Descriptions

  • Description transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: nucleotide binding | LOCATED IN: nucleolus, heterotrimeric G-protein complex | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , Small-subunit processome, Utp12 , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G21540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007148 Small-subunit processome, Utp12
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
Mapman id Description
17.1.3.2.1.3.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (UTP12)