Gene: Sopen10g005980
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen10g005980
- Transcript Identifier Sopen10g005980.1
- Gene Type Coding gene
- Location Spenn-ch10 : 4792678-4797894 : positive
Gene Family Information
- ID HOM05D000773
- #Genes/#Species 761/96
- Phylogenetic origin
- ID ORTHO05D000588
- #Genes/#Species 758/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen10g005980.1
Descriptions
- Description ARID/BRIGHT DNA-binding domain, ELM2 domain protein | FUNCTIONS IN: DNA binding | LOCATED IN: vacuole | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , ELM2 , ARID/BRIGHT DNA-binding domain | BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain, ELM2 domain protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048235 | ISO | PLAZA Integrative Orthology | pollen sperm cell differentiation | AT2G46040 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT2G46040 |
| GO:0016575 | ISO | PLAZA Integrative Orthology | histone deacetylation | AT2G46040 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048555 | ISO | PLAZA Integrative Orthology | generative cell nucleus | AT2G46040 |
| GO:0000118 | ISO | PLAZA Integrative Orthology | histone deacetylase complex | AT2G46040 |
| GO:0048556 | ISO | PLAZA Integrative Orthology | microsporocyte nucleus | AT2G46040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.25 | RNA biosynthesis.transcriptional regulation.transcription factor (ARID) |