Gene: Sopen10g003610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g003610
  • Transcript Identifier Sopen10g003610.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 2087403-2091995 : negative

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g003610.1

Descriptions

  • Description member of RAB gene family | RAB GTPase homolog B1C (RABB1C) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth | LOCATED IN: plasma membrane, vacuole, membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: GTP-binding 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006888
ISO
PLAZA Integrative Orthologyendoplasmic reticulum to Golgi vesicle-mediated transport AT4G17170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G17170
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G17170
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G17170
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT4G17170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005225 Small GTP-binding protein domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001806 Small GTPase
Mapman id Description
22.3.4.1.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.B-class RAB GTPase