Gene: Sopen10g003300

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g003300
  • Transcript Identifier Sopen10g003300.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 1859228-1862562 : positive

Gene Family Information

  • ID HOM05D000603
  • #Genes/#Species 936/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g003300.1

Descriptions

  • Description cobalt ion binding | FUNCTIONS IN: cobalt ion binding | LOCATED IN: mitochondrion | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016554
IEA
InterProcytidine to uridine editing
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT3G15000
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT3G15000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT3G15000
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G15000
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G15000
GO:0046983
ISO
PLAZA Integrative Orthologyprotein dimerization activity AT3G15000
GO:0050897
ISO
PLAZA Integrative Orthologycobalt ion binding AT3G15000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G15000
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G15000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039206 MORF/ORRM1/DAG-like
Mapman id Description
16.11.3.3.1 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (MORF)