Gene: Sopen09g033890
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g033890
- Transcript Identifier Sopen09g033890.1
- Gene Type Coding gene
- Location Spenn-ch09 : 81933567-81936641 : negative
Gene Family Information
- ID HOM05D000117
- #Genes/#Species 2876/97
- Phylogenetic origin
- ID ORTHO05D000070
- #Genes/#Species 2531/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen09g033890.1
Descriptions
- Description Auxin induced gene, IAA13 (IAA13). | auxin-induced protein 13 (IAA13) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to auxin stimulus, response to cyclopentenone | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation , AUX/IAA protein | BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT1G04550 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT1G04550 |
| GO:0009880 | ISO | PLAZA Integrative Orthology | embryonic pattern specification | AT1G04550 |
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT1G04550 |
| GO:0010600 | ISO | PLAZA Integrative Orthology | regulation of auxin biosynthetic process | Solyc09g090910.3 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Solyc09g090910.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G04550 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G04550 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G04550 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 11.2.2.2 | Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX) |