Gene: Sopen09g033570
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g033570
- Transcript Identifier Sopen09g033570.2
- Gene Type Coding gene
- Location Spenn-ch09 : 81678853-81683548 : negative
Gene Family Information
- ID HOM05D000728
- #Genes/#Species 799/100
- Phylogenetic origin
- ID ORTHO05D001586
- #Genes/#Species 385/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen09g033570.2
Descriptions
- Description Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. | SUVR4 | FUNCTIONS IN: histone-lysine N-methyltransferase activity | INVOLVED IN: chromatin modification | LOCATED IN: nucleolus | CONTAINS InterPro DOMAIN/s: SET domain , WIYLD domain , Pre-SET zinc-binding sub-group , Pre-SET domain | BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034968 | IEA | InterPro | histone lysine methylation | |
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D000728 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0018024 | IEA | InterPro | histone-lysine N-methyltransferase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D000728 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G04380 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G04380 |
| GO:0005840 | ISO | PLAZA Homology (enrichment) | ribosome | HOM05D000728 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.3.6 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-V histone methyltransferase (Suvar) |