Gene: AT3G04380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04380
  • Transcript Identifier AT3G04380.1
  • Gene Type Coding gene
  • Location Chr3 : 1161602-1164539 : positive

Gene Family Information

  • ID HOM05D000728
  • #Genes/#Species 799/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04380.1
  • symbol SUVR4
  • uniprot Q8W595

Descriptions

  • Description SET-domain containing protein lysine methyltransferase family protein
  • Computational description SUVR4; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), WIYLD domain (InterPro:IPR018848), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: homolog of SU(var)3-9 1 (TAIR:AT1G04050.1); Has 4363 Blast hits to 4175 proteins in 400 species: Archae - 0; Bacteria - 292; Metazoa - 1951; Fungi - 458; Plants - 898; Viruses - 0; Other Eukaryotes - 764 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000728
GO:0034968
IDA
IEA
Gene Ontologyhistone lysine methylation1
GO:0034968
IEA
InterProhistone lysine methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D000728
GO:0005515
IEA
InterProprotein binding
GO:0018024
IDA
IEA
Gene Ontologyhistone-lysine N-methyltransferase activity1
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D000728
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma2
GO:0005694
IEA
GOA Databasechromosome
GO:0005730
IDA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043017 WIYLD domain superfamily
IPR007728 Pre-SET domain
IPR001214 SET domain
IPR018848 WIYLD domain
Mapman id Description
12.3.3.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-V histone methyltransferase (Suvar)