Gene: Sopen09g028810

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g028810
  • Transcript Identifier Sopen09g028810.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 77027924-77033999 : negative

Gene Family Information

  • ID HOM05D000280
  • #Genes/#Species 1564/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g028810.1

Descriptions

  • Description GTP binding Elongation factor Tu family protein | FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding | INVOLVED IN: response to cadmium ion | LOCATED IN: mitochondrion, cell wall | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle , Translation elongation factor EFTu/EF1A, C-terminal , Small GTP-binding protein , Translation elongation factor EFTu/EF1A, domain 2 , Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal , Protein synthesis factor, GTP-binding , Translation elongation/initiation factor/Ribosomal, beta-barrel | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
InterProtranslational elongation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G02930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003746
IEA
InterProtranslation elongation factor activity
GO:0003924
IEA
InterProGTPase activity
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT4G02930
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT4G02930
GO:0050897
ISO
PLAZA Integrative Orthologycobalt ion binding AT4G02930

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G02930
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT4G02930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR033720 Elongation factor Tu, domain 2
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle
IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain
IPR000795 Translational (tr)-type GTP-binding domain
IPR005225 Small GTP-binding protein domain
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR009000 Translation protein, beta-barrel domain superfamily
Mapman id Description
17.7.4.1 Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Tu)