Gene: Sopen09g028620
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g028620
- Transcript Identifier Sopen09g028620.2
- Gene Type Coding gene
- Location Spenn-ch09 : 76839845-76846474 : negative
Gene Family Information
- ID HOM05D000184
- #Genes/#Species 2081/100
- Phylogenetic origin
- ID ORTHO05D000032
- #Genes/#Species 3442/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen09g028620.2
Descriptions
- Description Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling. | phosphate starvation response 1 (PHR1) | CONTAINS InterPro DOMAIN/s: Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Myb-like DNA-binding domain, SHAQKYF class , Homeodomain-related | BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055063 | ISO | PLAZA Integrative Orthology | sulfate ion homeostasis | AT4G28610 |
| GO:0071486 | ISO | PLAZA Integrative Orthology | cellular response to high light intensity | AT4G28610 |
| GO:0034765 | ISO | PLAZA Integrative Orthology | regulation of ion transmembrane transport | AT4G28610 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT4G28610 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT2G20400 |
| GO:1903842 | ISO | PLAZA Integrative Orthology | response to arsenite ion | AT4G28610 |
| GO:0016036 | ISO | PLAZA Integrative Orthology | cellular response to phosphate starvation | AT4G28610 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT4G28610 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G29000 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G28610 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |