Gene: Sopen09g025760

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g025760
  • Transcript Identifier Sopen09g025760.5
  • Gene Type Coding gene
  • Location Spenn-ch09 : 71786441-71798790 : positive

Gene Family Information

  • ID HOM05D002279
  • #Genes/#Species 296/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g025760.5

Descriptions

  • Description PRP39 | INVOLVED IN: regulation of timing of transition from vegetative to reproductive phase | LOCATED IN: intracellular | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT1G04080

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR003107 HAT (Half-A-TPR) repeat
Mapman id Description
16.2.1.1.5.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP39)