Gene: Sopen09g020680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g020680
  • Transcript Identifier Sopen09g020680.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 56856734-56858460 : negative

Gene Family Information

  • ID HOM05D000215
  • #Genes/#Species 1875/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g020680.1

Descriptions

  • Description The protein that is predicted to be encoded by this gene model lacks the U-box domain identified in the AT3G07360.1 gene model. | plant U-box 9 (PUB9) | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:1900034
ISO
PLAZA Integrative Orthologyregulation of cellular response to heat AT5G18340
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT3G07360
GO:0042631
ISO
PLAZA Integrative Orthologycellular response to water deprivation AT5G18320
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT3G07360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT5G18340
GO:0070696
ISO
PLAZA Integrative Orthologytransmembrane receptor protein serine/threonine kinase binding AT3G07360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G07360
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G07360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR000225 Armadillo
IPR016024 Armadillo-type fold
IPR003613 U box domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase