Gene: AT3G07360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G07360
  • Transcript Identifier AT3G07360.1
  • Gene Type Coding gene
  • Location Chr3 : 2354884-2356613 : positive

Gene Family Information

  • ID HOM05D000215
  • #Genes/#Species 1875/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G07360.1
  • symbol PUB9
  • Alias ATPUB9,ARABIDOPSIS THALIANA PLANT U-BOX 9
  • uniprot Q3EBB0

Descriptions

  • Description plant U-box 9
  • Computational description plant U-box 9 (PUB9); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18320.1); Has 3234 Blast hits to 3002 proteins in 224 species: Archae - 0; Bacteria - 16; Metazoa - 312; Fungi - 206; Plants - 2395; Viruses - 3; Other Eukaryotes - 302 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IDA
IEA
Gene Ontologyprotein ubiquitination1
GO:0016567
IEA
InterProprotein ubiquitination
GO:0071215
IMP
Gene Ontologycellular response to abscisic acid stimulus2
GO:0048527
IGI
Gene Ontologylateral root development3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity1
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0070696
IPI
Gene Ontologytransmembrane receptor protein serine/threonine kinase binding2
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000215

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus2 4
GO:0005886
IDA
Gene Ontologyplasma membrane2
GO:0005737
IBA
Gene Ontologycytoplasm4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR003613 U box domain
IPR016024 Armadillo-type fold
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase