Gene: Sopen09g004100
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g004100
- Transcript Identifier Sopen09g004100.1
- Gene Type Coding gene
- Location Spenn-ch09 : 2865702-2937864 : positive
Gene Family Information
- ID HOM05D001092
- #Genes/#Species 562/99
- Phylogenetic origin
- ID ORTHO05D000923
- #Genes/#Species 551/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen09g004100.1
Descriptions
- Description calcium-dependent lipid-binding family protein | FUNCTIONS IN: phosphoinositide binding | INVOLVED IN: signal transduction | LOCATED IN: chloroplast | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein , Protein of unknown function DUF946 , Vacuolar protein sorting-associated protein , C2 calcium/lipid-binding domain, CaLB | BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G48090 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009543 | Vacuolar protein sorting-associated protein 13, SHR-binding domain |
| IPR026854 | Vacuolar protein sorting-associated protein 13-like, N-terminal domain |
| IPR031642 | VPS13, repeated coiled region |
| IPR006614 | Peroxin/Ferlin domain |
| IPR001849 | Pleckstrin homology domain |
| IPR009291 | Vacuolar protein sorting-associated protein 62 |
| IPR035892 | C2 domain superfamily |
| IPR031646 | Vacuolar protein sorting-associated protein 13, second N-terminal domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |