Gene: Sopen08g028480

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g028480
  • Transcript Identifier Sopen08g028480.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 68001815-68006248 : positive

Gene Family Information

  • ID HOM05D001212
  • #Genes/#Species 516/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g028480.1

Descriptions

  • Description Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46. | KNOTTED-like homeobox of Arabidopsis thaliana 7 (KNAT7) | CONTAINS InterPro DOMAIN/s: ELK , KNOX1 , Homeobox , Homeodomain-like , KNOX2 , Homeodomain-related | BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010192
ISO
PLAZA Integrative Orthologymucilage biosynthetic process AT1G62990
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G62990
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT1G62990
GO:0080112
ISO
PLAZA Integrative Orthologyseed growth AT1G62990
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT1G62990
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT1G62990
GO:2000652
ISO
PLAZA Integrative Orthologyregulation of secondary cell wall biogenesis AT1G62990

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G62990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR005541 KNOX2
IPR005540 KNOX1
IPR008422 Homeobox KN domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)