Gene: Sopen08g026680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g026680
  • Transcript Identifier Sopen08g026680.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 66448057-66449025 : positive

Gene Family Information

  • ID HOM05D000124
  • #Genes/#Species 2752/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g026680.1

Descriptions

  • Description encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. | ethylene responsive element binding factor 5 (ERF5) | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT4G17490
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G17490
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G47230
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G47230
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT4G17490
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G47230
GO:0000302
ISO
PLAZA Integrative Orthologyresponse to reactive oxygen species AT4G17490
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT4G17490
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT4G17490
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT4G17490
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G17490
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G17490
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G47230
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT4G17490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036955 AP2/ERF domain superfamily
IPR001471 AP2/ERF domain
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)