Gene: Sopen08g026440

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g026440
  • Transcript Identifier Sopen08g026440.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 66246441-66253555 : negative

Gene Family Information

  • ID HOM05D001144
  • #Genes/#Species 541/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g026440.1

Descriptions

  • Description 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato), Encodes a catalytic subunit of the mitochondrially-localized NAD - dependent isocitrate dehydrogenase. | isocitrate dehydrogenase V (IDH-V) | FUNCTIONS IN: isocitrate dehydrogenase (NAD ) activity, zinc ion binding, ATP binding | INVOLVED IN: isocitrate metabolic process, tricarboxylic acid cycle, metabolic process | LOCATED IN: mitochondrion, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase , Isocitrate dehydrogenase NAD-dependent, mitochondrial , Isocitrate/isopropylmalate dehydrogenase, conserved site | BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase VI
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006099
IEA
InterProtricarboxylic acid cycle
GO:0006102
ISO
PLAZA Integrative Orthologyisocitrate metabolic process AT3G09810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0004449
IEA
InterProisocitrate dehydrogenase (NAD+) activity
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT5G03290
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT5G03290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G09810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024084 Isopropylmalate dehydrogenase-like domain
IPR004434 Isocitrate dehydrogenase NAD-dependent
Mapman id Description
2.3.3.1 Cellular respiration.tricarboxylic acid cycle.isocitrate dehydrogenase heterodimer.catalytic component