Gene: AT5G03290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G03290
  • Transcript Identifier AT5G03290.1
  • Gene Type Coding gene
  • Location Chr5 : 794043-795939 : positive

Gene Family Information

  • ID HOM05D001144
  • #Genes/#Species 541/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G03290.1
  • symbol IDH-V
  • uniprot Q945K7

Descriptions

  • Description isocitrate dehydrogenase V
  • Computational description isocitrate dehydrogenase V (IDH-V); FUNCTIONS IN: isocitrate dehydrogenase (NAD ) activity, zinc ion binding, ATP binding; INVOLVED IN: isocitrate metabolic process, tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase VI (TAIR:AT3G09810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006099
IEA
GOA Databasetricarboxylic acid cycle
GO:0006099
IBA
TAS
Gene Ontologytricarboxylic acid cycle1 2
GO:0006099
IEA
InterProtricarboxylic acid cycle
GO:0006102
IMP
IBA
Gene Ontologyisocitrate metabolic process1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004449
IEA
GOA Databaseisocitrate dehydrogenase (NAD+) activity
GO:0004449
IMP
IBA
Gene Ontologyisocitrate dehydrogenase (NAD+) activity1 2
GO:0004449
IEA
InterProisocitrate dehydrogenase (NAD+) activity
GO:0016616
IEA
GOA Databaseoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005524
IDA
GOA DatabaseATP binding
GO:0005524
HDA
Gene OntologyATP binding3
GO:0008270
IDA
GOA Databasezinc ion binding
GO:0008270
HDA
Gene Ontologyzinc ion binding4
GO:0000287
IEA
Gene Ontologymagnesium ion binding
GO:0051287
IEA
Gene OntologyNAD binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA
IEA
GOA Databasemitochondrion
GO:0005739
HDA
IBA
Gene Ontologymitochondrion2 5
GO:0005886
HDA
Gene Ontologyplasma membrane6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024084 Isopropylmalate dehydrogenase-like domain
IPR004434 Isocitrate dehydrogenase NAD-dependent
Mapman id Description
2.3.3.1 Cellular respiration.tricarboxylic acid cycle.isocitrate dehydrogenase heterodimer.catalytic component