Gene: Sopen08g026110
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g026110
- Transcript Identifier Sopen08g026110.1
- Gene Type Coding gene
- Location Spenn-ch08 : 65943746-65946728 : positive
Gene Family Information
- ID HOM05D000404
- #Genes/#Species 1248/99
- Phylogenetic origin
- ID ORTHO05D001765
- #Genes/#Species 358/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g026110.1
Descriptions
- Description Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected). | chloroplast beta-amylase (CT-BMY) | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site , Glycoside hydrolase, family 14 , Glycoside hydrolase, catalytic core , Glycoside hydrolase, family 14B, plant , Glycoside hydrolase, subgroup, catalytic core | BEST Arabidopsis thaliana protein match is: beta-amylase 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000272 | IEA | InterPro | polysaccharide catabolic process | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT4G17090 |
| GO:0005983 | ISO | PLAZA Integrative Orthology | starch catabolic process | AT4G17090 |
| GO:0000024 | ISO | PLAZA Integrative Orthology | maltose biosynthetic process | AT4G17090 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016161 | IEA | InterPro | beta-amylase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G17090 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 3.2.3.3.1.2 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase |