Gene: AT5G46760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G46760
  • Transcript Identifier AT5G46760.1
  • Gene Type Coding gene
  • Location Chr5 : 18974231-18976009 : positive

Gene Family Information

  • ID HOM05D000567
  • #Genes/#Species 974/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G46760.1
  • symbol MYC3
  • uniprot Q9FIP9

Descriptions

  • Description Basic helix-loop-helix (bHLH) DNA-binding family protein
  • Computational description Basic helix-loop-helix (bHLH) DNA-binding family protein; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: Basic helix-loop-helix (bHLH) DNA-binding family protein (TAIR:AT4G17880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis Solyc08g005050.4
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
IMP
Gene Ontologydefense response3
GO:0106167
IMP
Gene Ontologyextracellular ATP signaling4
GO:0010374
IGI
Gene Ontologystomatal complex development5
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated6
GO:0009753
IMP
Gene Ontologyresponse to jasmonic acid6
GO:0009718
IMP
Gene Ontologyanthocyanin-containing compound biosynthetic process6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Solyc08g076930.1
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000976
IBA
Gene Ontologytranscription cis-regulatory region binding2
GO:0043425
IPI
Gene OntologybHLH transcription factor binding3
GO:0005515
IPI
Gene Ontologyprotein binding7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025610 Transcription factor MYC/MYB N-terminal
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR045084 Transcription factor AIB/MYC-like
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)