Gene: Sopen08g023390
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g023390
- Transcript Identifier Sopen08g023390.1
- Gene Type Coding gene
- Location Spenn-ch08 : 63161520-63163332 : positive
Gene Family Information
- ID HOM05D002256
- #Genes/#Species 299/98
- Phylogenetic origin
- ID ORTHO05D002533
- #Genes/#Species 281/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen08g023390.1
Descriptions
- Description One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3). | eukaryotic translation initiation factor 3G1 (EIF3G1) | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Translation initiation factor 3, RNA-binding subunit | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3G2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | ISO | PLAZA Integrative Orthology | translational initiation | AT3G11400 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G11400 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G11400 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005852 | IEA | InterPro | eukaryotic translation initiation factor 3 complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR017334 | Eukaryotic translation initiation factor 3 subunit G |
| IPR024675 | Eukaryotic translation initiation factor 3 subunit G, N-terminal |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR035979 | RNA-binding domain superfamily |
| IPR034240 | eIF3G, RNA recognition motif |
| Mapman id | Description |
|---|---|
| 17.4.1.3.7 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3g |