Gene: Sopen08g003310

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g003310
  • Transcript Identifier Sopen08g003310.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 2157662-2168258 : positive

Gene Family Information

  • ID HOM05D001495
  • #Genes/#Species 424/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g003310.1

Descriptions

  • Description flowering time control protein-related / FCA gamma-related | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Ribonucleoprotein, BRUNO-like , WW/Rsp5/WWP , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA binding, abscisic acid binding
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development Os09g0123200
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase Os09g0123200
GO:0008361
ISO
PLAZA Integrative Orthologyregulation of cell size Os09g0123200
GO:0080113
ISO
PLAZA Integrative Orthologyregulation of seed growth Os09g0123200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G47310
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001495

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os09g0123200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001202 WW domain
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036020 WW domain superfamily
Mapman id Description
35.1 not assigned.annotated