Gene: Sopen08g003150
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g003150
- Transcript Identifier Sopen08g003150.1
- Gene Type Coding gene
- Location Spenn-ch08 : 1996738-2001535 : negative
Gene Family Information
- ID HOM05D000584
- #Genes/#Species 950/99
- Phylogenetic origin
- ID ORTHO05D000458
- #Genes/#Species 911/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen08g003150.1
Descriptions
- Description Plant VAMP (vesicle-associated membrane protein) family protein | FUNCTIONS IN: structural molecule activity | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: PapD-like , Major sperm protein , Vesicle-associated membrane protein | BEST Arabidopsis thaliana protein match is: vesicle associated protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005789 | IEA | InterPro | endoplasmic reticulum membrane | |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT5G47180 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G47180 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 20.7.1 | Cytoskeleton organisation.endoplasmic reticulum-cytoskeleton-plasma membrane interface.contact site protein (VAP27) |