Gene: Sopen08g001290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g001290
  • Transcript Identifier Sopen08g001290.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 255677-260683 : negative

Gene Family Information

  • ID HOM05D000812
  • #Genes/#Species 727/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g001290.1

Descriptions

  • Description Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm. | WWE protein-protein interaction domain protein family | CONTAINS InterPro DOMAIN/s: WWE domain , Poly(ADP-ribose) polymerase, catalytic domain , RST domain of plant C-terminal | BEST Arabidopsis thaliana protein match is: similar to RCD one 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G32230
GO:0010102
ISO
PLAZA Integrative Orthologylateral root morphogenesis AT1G32230
GO:0012501
ISO
PLAZA Integrative Orthologyprogrammed cell death AT1G32230
GO:0006809
ISO
PLAZA Integrative Orthologynitric oxide biosynthetic process AT1G32230
GO:2000377
ISO
PLAZA Integrative Orthologyregulation of reactive oxygen species metabolic process AT1G32230
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G32230
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT2G35510
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G32230
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT1G32230
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G32230
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT1G32230
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT1G32230
GO:0000303
ISO
PLAZA Integrative Orthologyresponse to superoxide AT1G32230
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT1G32230
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G32230
GO:0010193
ISO
PLAZA Integrative Orthologyresponse to ozone AT1G32230
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G32230

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G32230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G32230
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G32230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022003 RST domain
IPR044964 Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5
Mapman id Description
35.1 not assigned.annotated