Gene: Sopen07g032710

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g032710
  • Transcript Identifier Sopen07g032710.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 77778997-77782504 : negative

Gene Family Information

  • ID HOM05D000561
  • #Genes/#Species 984/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g032710.1

Descriptions

  • Description RBP45B | FUNCTIONS IN: RNA binding | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding protein 45A
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051028
ISO
PLAZA Integrative OrthologymRNA transport Os04g0625800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os04g0625800
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G27000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os04g0625800
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os04g0625800
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G27000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.8.4 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (RBP45/47)