Gene: Sopen07g029940

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g029940
  • Transcript Identifier Sopen07g029940.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 75502508-75509479 : positive

Gene Family Information

  • ID HOM05D001023
  • #Genes/#Species 593/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g029940.1

Descriptions

  • Description RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain. | CTC-interacting domain 9 (CID9) | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Ataxin-2, C-terminal | BEST Arabidopsis thaliana protein match is: CTC-interacting domain 8
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G53650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR009818 Ataxin-2, C-terminal
Mapman id Description
35.1 not assigned.annotated