Gene: Sopen07g029900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g029900
  • Transcript Identifier Sopen07g029900.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 75432008-75435706 : positive

Gene Family Information

  • ID HOM05D000945
  • #Genes/#Species 634/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g029900.1

Descriptions

  • Description Aldolase-type TIM barrel family protein | FUNCTIONS IN: glycolate oxidase activity | INVOLVED IN: oxidation reduction, metabolic process | LOCATED IN: apoplast, chloroplast, peroxisome, membrane | EXPRESSED IN: cotyledon, guard cell, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel , FMN-dependent alpha-hydroxy acid dehydrogenase, active site , FMN-dependent dehydrogenase , Alpha-hydroxy acid dehydrogenase, FMN-dependent | BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050665
ISO
PLAZA Integrative Orthologyhydrogen peroxide biosynthetic process AT4G18360
GO:0019048
ISO
PLAZA Integrative Orthologymodulation by virus of host process Os03g0786100
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT4G18360
GO:0010109
ISO
PLAZA Integrative Orthologyregulation of photosynthesis Os03g0786100
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G18360
GO:0009853
ISO
PLAZA Integrative Orthologyphotorespiration Os03g0786100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G14415
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os03g0786100
GO:0003824
IEA
InterProcatalytic activity
GO:0003973
ISO
PLAZA Integrative Orthology(S)-2-hydroxy-acid oxidase activity AT3G14420
GO:0008891
ISO
PLAZA Integrative Orthologyglycolate oxidase activity AT3G14420
GO:0016491
IEA
InterProoxidoreductase activity
GO:0010181
IEA
InterProFMN binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G14420
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G14420
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G14420
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G14420
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT4G18360
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G14420
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G14420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
IPR000262 FMN-dependent dehydrogenase
Mapman id Description
1.3.2 Photosynthesis.photorespiration.glycolate oxidase