Gene: Sopen07g029230

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g029230
  • Transcript Identifier Sopen07g029230.2
  • Gene Type Coding gene
  • Location Spenn-ch07 : 74841898-74852146 : negative

Gene Family Information

  • ID HOM05D000115
  • #Genes/#Species 2905/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g029230.2

Descriptions

  • Description Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope. | protein phosphatase 5.2 (PP5.2) | FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity | INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway | LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 , Metallophosphoesterase , Protein phosphatase 5 , Tetratricopeptide-like helical , Serine/threonine phosphatase, PPP5 , Tetratricopeptide repeat-containing , Tetratricopeptide repeat , Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase | BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT2G42810
GO:1902325
ISO
PLAZA Integrative Orthologynegative regulation of chlorophyll biosynthetic process AT2G42810
GO:0010019
ISO
PLAZA Integrative Orthologychloroplast-nucleus signaling pathway AT2G42810
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT2G42810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
InterProhydrolase activity
GO:0005515
IEA
InterProprotein binding
GO:0046906
ISO
PLAZA Integrative Orthologytetrapyrrole binding AT2G42810
GO:0004721
ISO
PLAZA Integrative Orthologyphosphoprotein phosphatase activity AT2G42810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT2G42810
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G42810
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G42810
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G42810
GO:0030176
ISO
PLAZA Integrative Orthologyintegral component of endoplasmic reticulum membrane AT2G42810
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G42810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004843 Calcineurin-like phosphoesterase domain, ApaH type
IPR013235 PPP domain
IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR041753 PP5, C-terminal metallophosphatase domain
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR001440 Tetratricopeptide repeat 1
IPR029052 Metallo-dependent phosphatase-like
IPR019734 Tetratricopeptide repeat
Mapman id Description
18.4.25.1.4 Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP5-class phosphatase