Gene: Sopen07g028530

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g028530
  • Transcript Identifier Sopen07g028530.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 74206541-74210681 : negative

Gene Family Information

  • ID HOM05D000395
  • #Genes/#Species 1259/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g028530.1

Descriptions

  • Description Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3 | REDUCED VERNALIZATION RESPONSE 1 (VRN1) | CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 | BEST Arabidopsis thaliana protein match is: related to vernalization1 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G49480
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT3G18990
GO:0010048
ISO
PLAZA Integrative Orthologyvernalization response AT3G18990
GO:0034613
ISO
PLAZA Integrative Orthologycellular protein localization AT1G49480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G18960
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G18990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G49480
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G49480
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT3G18990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR003340 B3 DNA binding domain
Mapman id Description
35.1 not assigned.annotated