Gene: AT3G18990
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G18990
- Transcript Identifier AT3G18990.2
- Gene Type Coding gene
- Location Chr3 : 6548552-6551568 : negative
Gene Family Information
- ID HOM05D000395
- #Genes/#Species 1259/89
- Phylogenetic origin
- ID ORTHO05D000088
- #Genes/#Species 2284/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G18990.2
- symbol VRN1
- Alias REM39,REPRODUCTIVE MERISTEM 39
- full_name REDUCED VERNALIZATION RESPONSE 1
- uniprot Q8L3W1
Descriptions
- Description AP2/B3-like transcriptional factor family protein
- Computational description REDUCED VERNALIZATION RESPONSE 1 (VRN1); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: related to vernalization1 1 (TAIR:AT1G49480.1); Has 683 Blast hits to 597 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009909 | IMP | Gene Ontology | regulation of flower development | 1 |
| GO:0010048 | IMP | Gene Ontology | vernalization response | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IDA | Gene Ontology | DNA binding | 1 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005654 | IDA | Gene Ontology | nucleoplasm | 4 |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.5.2 | RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (REM) |