Gene: Sopen07g026930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g026930
  • Transcript Identifier Sopen07g026930.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 72673314-72678176 : positive

Gene Family Information

  • ID HOM05D000064
  • #Genes/#Species 3993/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g026930.1

Descriptions

  • Description Ras-related protein YPT3 - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), small GTP-binding protein (ara-2) | ARA-2 | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab11-related | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1C
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G06400
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT1G06400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G06400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G06400
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G06400
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G06400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001806 Small GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.4.1.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.A-class RAB GTPase