Gene: Sopen07g025900

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g025900
  • Transcript Identifier Sopen07g025900.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 71703845-71706349 : negative

Gene Family Information

  • ID HOM05D001095
  • #Genes/#Species 559/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g025900.1

Descriptions

  • Description Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770 | HSD4 has two copies due to the same gene duplication event occurred to HSD1) . At5g50690 is also named as HSD7 . HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds | transcript disappears during germination. | hydroxysteroid dehydrogenase 1 (HSD1) | FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity | INVOLVED IN: oxidation reduction, metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: seed | CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site , NAD(P)-binding domain , Glucose/ribitol dehydrogenase , Short-chain dehydrogenase/reductase SDR | BEST Arabidopsis thaliana protein match is: hydroxysteroid dehydrogenase 1
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
5.9.4 Lipid metabolism.lipid droplet-associated activities.dehydrogenase (STEROLEOSIN/SLO/HSD)