Gene: Sopen07g025740

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g025740
  • Transcript Identifier Sopen07g025740.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 71532742-71540396 : positive

Gene Family Information

  • ID HOM05D003409
  • #Genes/#Species 201/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g025740.1

Descriptions

  • Description Encodes a homolog of the S. cerevisiae Nop2 that is involved in ribosome biogenesis and plays a role on organ size control by promoting cell proliferation and preventing compensation in normal leaf development. | OLIGOCELLULA 2 (OLI2) | FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, RNA binding | INVOLVED IN: cell proliferation, leaf morphogenesis, root morphogenesis | LOCATED IN: nucleolus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p , Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site , Nop2p | BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0001510
IEA
InterProRNA methylation
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G55920
GO:0090069
ISO
PLAZA Integrative Orthologyregulation of ribosome biogenesis AT5G55920
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT5G55920
GO:0042127
ISO
PLAZA Integrative Orthologyregulation of cell population proliferation AT5G55920
GO:0010015
ISO
PLAZA Integrative Orthologyroot morphogenesis AT5G55920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003723
IEA
InterProRNA binding
GO:0008757
IEA
InterProS-adenosylmethionine-dependent methyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G55920
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G26600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal
IPR011023 Nop2p
IPR023267 RNA (C5-cytosine) methyltransferase
IPR023273 RNA (C5-cytosine) methyltransferase, NOP2
Mapman id Description
17.1.2.2.3.6 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (OLI2)