Gene: Sopen07g024380

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g024380
  • Transcript Identifier Sopen07g024380.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 69813500-69815137 : positive

Gene Family Information

  • ID HOM05D000063
  • #Genes/#Species 3996/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g024380.1

Descriptions

  • Description Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. | phytochrome a signal transduction 1 (PAT1) | CONTAINS InterPro DOMAIN/s: Transcription factor GRAS | BEST Arabidopsis thaliana protein match is: SCARECROW-like 21
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT5G48150
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G48150
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G50600
GO:1990110
ISO
PLAZA Integrative Orthologycallus formation AT5G48150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G48150
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G48150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G48150
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G50600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005202 Transcription factor GRAS
Mapman id Description
15.5.12 RNA biosynthesis.transcriptional regulation.transcription factor (GRAS)