Gene: Sopen07g021870
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen07g021870
- Transcript Identifier Sopen07g021870.1
- Gene Type Coding gene
- Location Spenn-ch07 : 65819024-65820974 : positive
Gene Family Information
- ID HOM05D002686
- #Genes/#Species 256/96
- Phylogenetic origin
- ID ORTHO05D003222
- #Genes/#Species 237/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen07g021870.1
Descriptions
- Description Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES. | chaperonin 20 (CPN20) | CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 , GroES-like , Chaperonin Cpn10, conserved site , Chaperonin 21, chloroplast , Chaperonin Cpn10, subgroup | BEST Arabidopsis thaliana protein match is: chaperonin 10 ., 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G20720 |
| GO:0009788 | ISO | PLAZA Integrative Orthology | negative regulation of abscisic acid-activated signaling pathway | AT5G20720 |
| GO:0051290 | ISO | PLAZA Integrative Orthology | protein heterotetramerization | AT5G20720 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT5G20720 |
| GO:1901671 | IEA | InterPro | positive regulation of superoxide dismutase activity | |
| GO:0006457 | IEA | InterPro | protein folding |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT5G20720 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G20720 |
| GO:0005516 | ISO | PLAZA Integrative Orthology | calmodulin binding | AT5G20720 |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0046914 | IEA | InterPro | transition metal ion binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT5G20720 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G20720 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT5G20720 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G20720 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT5G20720 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT5G20720 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G20720 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G20720 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |