Gene: Sopen07g020630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g020630
  • Transcript Identifier Sopen07g020630.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 62471744-62475637 : negative

Gene Family Information

  • ID HOM05D001583
  • #Genes/#Species 405/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g020630.1

Descriptions

  • Description Ribosomal protein S3 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: response to salt stress, translation | LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type , K Homology, type 2 , K Homology , Ribosomal protein S3, C-terminal , Ribosomal protein S3, eukaryotic/archaeal | BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G53870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G31610
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G53870
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G53870
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT3G53870
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G31610
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G31610
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G35530
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G31610
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G53870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036419 Ribosomal protein S3, C-terminal domain superfamily
IPR004044 K Homology domain, type 2
IPR001351 Ribosomal protein S3, C-terminal
IPR009019 K homology domain superfamily, prokaryotic type
IPR005703 Ribosomal protein S3, eukaryotic/archaeal
IPR015946 K homology domain-like, alpha/beta
Mapman id Description
17.1.3.1.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS3