Gene: AT5G35530

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G35530
  • Transcript Identifier AT5G35530.1
  • Gene Type Coding gene
  • Location Chr5 : 13710355-13712192 : negative

Gene Family Information

  • ID HOM05D001583
  • #Genes/#Species 405/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G35530.1
  • uniprot Q9FJA6

Descriptions

  • Description Ribosomal protein S3 family protein
  • Computational description Ribosomal protein S3 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, prokaryotic type (InterPro:IPR009019), K Homology, type 2 (InterPro:IPR004044), K Homology (InterPro:IPR004087), Ribosomal protein S3, C-terminal (InterPro:IPR001351), Ribosomal protein S3, eukaryotic/archaeal (InterPro:IPR005703); BEST Arabidopsis thaliana protein match is: Ribosomal protein S3 family protein (TAIR:AT2G31610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 3
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus6
GO:0005634
IBA
Gene Ontologynucleus1
GO:0009536
HDA
Gene Ontologyplastid7
GO:0005794
RCA
Gene OntologyGolgi apparatus8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001351 Ribosomal protein S3, C-terminal
IPR005703 Ribosomal protein S3, eukaryotic/archaeal
IPR004044 K Homology domain, type 2
IPR036419 Ribosomal protein S3, C-terminal domain superfamily
IPR015946 K homology domain-like, alpha/beta
IPR009019 K homology domain superfamily, prokaryotic type
Mapman id Description
17.1.3.1.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS3