Gene: Sopen06g031290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g031290
  • Transcript Identifier Sopen06g031290.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 57237433-57242108 : positive

Gene Family Information

  • ID HOM05D004863
  • #Genes/#Species 152/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g031290.1

Descriptions

  • Description Encodes a RAD21-like gene essential for meiosis. Encodes a 617 a.a. protein that is slightly shorter in the N-terminus than SYN1 BP2. | SYNAPTIC 1 (SYN1) | CONTAINS InterPro DOMAIN/s: Rad21/Rec8 like protein, C-terminal , Rad21/Rec8 like protein, N-terminal | BEST Arabidopsis thaliana protein match is: sister chromatid cohesion 1 protein 4
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007062
IEA
InterProsister chromatid cohesion
GO:0051455
ISO
PLAZA Integrative Orthologymonopolar spindle attachment to meiosis I kinetochore AT5G05490
GO:0010032
ISO
PLAZA Integrative Orthologymeiotic chromosome condensation AT5G05490
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT5G05490
GO:0051754
ISO
PLAZA Integrative Orthologymeiotic sister chromatid cohesion, centromeric AT5G05490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008278
IEA
InterProcohesin complex
GO:0005694
ISO
PLAZA Integrative Orthologychromosome AT5G05490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR006909 Rad21/Rec8-like protein, C-terminal, eukaryotic
IPR023093 ScpA-like, C-terminal
IPR006910 Rad21/Rec8-like protein, N-terminal
IPR039781 Rad21/Rec8-like protein
Mapman id Description
13.3.4.1.4 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.meiotic-specific Kleisin-type component SYN1