Gene: Sopen06g024220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g024220
  • Transcript Identifier Sopen06g024220.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 51713077-51729576 : positive

Gene Family Information

  • ID HOM05D004632
  • #Genes/#Species 157/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g024220.1

Descriptions

  • Description Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID). | TBP-associated factor 5 (TAF5) | FUNCTIONS IN: transcription regulator activity, nucleotide binding | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: guard cell, root, inflorescence, cultured cell, leaf | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup , TFIID subunit, WD40-associated region | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR007582 TFIID subunit TAF5, NTD2 domain
IPR036322 WD40-repeat-containing domain superfamily
IPR037783 Transcription initiation factor TFIID subunit 5
IPR037264 TFIID subunit TAF5, NTD2 domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
15.3.4.1.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF5